Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv29A0A0G2LB96 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.65■□□□□ 0.58
Trbv29A0A0G2LB96 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv29A0A0G2LB96 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv29A0A0G2LB96 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.64■□□□□ 0.58
Trbv29A0A0G2LB96 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv29A0A0G2LB96 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trbv29A0A0G2LB96 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Trbv29A0A0G2LB96 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv29A0A0G2LB96 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv29A0A0G2LB96 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv29A0A0G2LB96 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv29A0A0G2LB96 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv29A0A0G2LB96 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv29A0A0G2LB96 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Trbv29A0A0G2LB96 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.58■□□□□ 0.56
Trbv29A0A0G2LB96 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv29A0A0G2LB96 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv29A0A0G2LB96 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.58■□□□□ 0.56
Trbv29A0A0G2LB96 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv29A0A0G2LB96 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv29A0A0G2LB96 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv29A0A0G2LB96 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv29A0A0G2LB96 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv29A0A0G2LB96 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv29A0A0G2LB96 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.56■□□□□ 0.56
Trbv29A0A0G2LB96 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv29A0A0G2LB96 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv29A0A0G2LB96 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv29A0A0G2LB96 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv29A0A0G2LB96 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv29A0A0G2LB96 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv29A0A0G2LB96 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv29A0A0G2LB96 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv29A0A0G2LB96 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv29A0A0G2LB96 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv29A0A0G2LB96 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms