Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tcrg-V4A0A0B4J1J8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tcrg-V4A0A0B4J1J8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcrg-V4A0A0B4J1J8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcrg-V4A0A0B4J1J8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tcrg-V4A0A0B4J1J8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcrg-V4A0A0B4J1J8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.83■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tcrg-V4A0A0B4J1J8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.75■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.74■□□□□ 0.27
Tcrg-V4A0A0B4J1J8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms