Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Igkv5-43A0A0B4J1J2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.39■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.39■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.37■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.35■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.35■■□□□ 1.33
Igkv5-43A0A0B4J1J2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Igkv5-43A0A0B4J1J2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.34■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv5-43A0A0B4J1J2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv5-43A0A0B4J1J2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Igkv5-43A0A0B4J1J2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.32■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Igkv5-43A0A0B4J1J2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.31■■□□□ 1.32
Igkv5-43A0A0B4J1J2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.3■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.27■■□□□ 1.32
Igkv5-43A0A0B4J1J2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv5-43A0A0B4J1J2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.25■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.21■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.21■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv5-43A0A0B4J1J2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv5-43A0A0B4J1J2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.2■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Gm10420-201ENSMUST00000121713 882 ntBASIC23.2■■□□□ 1.3
Igkv5-43A0A0B4J1J2 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.2■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv5-43A0A0B4J1J2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.17■■□□□ 1.3
Igkv5-43A0A0B4J1J2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.16■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.15■■□□□ 1.3
Igkv5-43A0A0B4J1J2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms