Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-5A0A075B6B9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-5A0A075B6B9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-5A0A075B6B9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.29■□□□□ 0.52
Trav6d-5A0A075B6B9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-5A0A075B6B9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Gm24970-201ENSMUST00000175582 82 ntBASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-5A0A075B6B9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6d-5A0A075B6B9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6d-5A0A075B6B9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trav6d-5A0A075B6B9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-5A0A075B6B9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-5A0A075B6B9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav6d-5A0A075B6B9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav6d-5A0A075B6B9 Zfp131-205ENSMUST00000223812 663 ntBASIC18.26■□□□□ 0.51
Trav6d-5A0A075B6B9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-5A0A075B6B9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-5A0A075B6B9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-5A0A075B6B9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-5A0A075B6B9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav6d-5A0A075B6B9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-5A0A075B6B9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trav6d-5A0A075B6B9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-5A0A075B6B9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-5A0A075B6B9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-5A0A075B6B9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav6d-5A0A075B6B9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-5A0A075B6B9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-5A0A075B6B9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav6d-5A0A075B6B9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6d-5A0A075B6B9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6d-5A0A075B6B9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav6d-5A0A075B6B9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6d-5A0A075B6B9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6d-5A0A075B6B9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-5A0A075B6B9 Gm9397-201ENSMUST00000200125 605 ntBASIC18.19■□□□□ 0.5
Trav6d-5A0A075B6B9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6d-5A0A075B6B9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav6d-5A0A075B6B9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6d-5A0A075B6B9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6d-5A0A075B6B9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6d-5A0A075B6B9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.18■□□□□ 0.5
Trav6d-5A0A075B6B9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.17■□□□□ 0.5
Trav6d-5A0A075B6B9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav6d-5A0A075B6B9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav6d-5A0A075B6B9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6d-5A0A075B6B9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav6d-5A0A075B6B9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6d-5A0A075B6B9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6d-5A0A075B6B9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6d-5A0A075B6B9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.14■□□□□ 0.5
Trav6d-5A0A075B6B9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav6d-5A0A075B6B9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6d-5A0A075B6B9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav6d-5A0A075B6B9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6d-5A0A075B6B9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6d-5A0A075B6B9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav6d-5A0A075B6B9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-5A0A075B6B9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-5A0A075B6B9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.13■□□□□ 0.49
Trav6d-5A0A075B6B9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6d-5A0A075B6B9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav6d-5A0A075B6B9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav6d-5A0A075B6B9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav6d-5A0A075B6B9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6d-5A0A075B6B9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6d-5A0A075B6B9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6d-5A0A075B6B9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6d-5A0A075B6B9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6d-5A0A075B6B9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6d-5A0A075B6B9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms