Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6n-6A0A075B6B2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6n-6A0A075B6B2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6n-6A0A075B6B2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6n-6A0A075B6B2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Gm6821-201ENSMUST00000107540 542 ntBASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6n-6A0A075B6B2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6n-6A0A075B6B2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-6A0A075B6B2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-6A0A075B6B2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-6A0A075B6B2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav6n-6A0A075B6B2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-6A0A075B6B2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-6A0A075B6B2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-6A0A075B6B2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav6n-6A0A075B6B2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6n-6A0A075B6B2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Gm8503-201ENSMUST00000118131 455 ntBASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-6A0A075B6B2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Trav6n-6A0A075B6B2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-6A0A075B6B2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav6n-6A0A075B6B2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-6A0A075B6B2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-6A0A075B6B2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-6A0A075B6B2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-6A0A075B6B2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav6n-6A0A075B6B2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-6A0A075B6B2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-6A0A075B6B2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav6n-6A0A075B6B2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav6n-6A0A075B6B2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-6A0A075B6B2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-6A0A075B6B2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav6n-6A0A075B6B2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Trav6n-6A0A075B6B2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-6A0A075B6B2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav6n-6A0A075B6B2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav6n-6A0A075B6B2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-6A0A075B6B2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Trav6n-6A0A075B6B2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.51■□□□□ 0.23
Trav6n-6A0A075B6B2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-6A0A075B6B2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms