Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Trav5-4A0A075B652 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18,65■□□□□ 0,58
Trav5-4A0A075B652 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18,65■□□□□ 0,58
Trav5-4A0A075B652 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18,65■□□□□ 0,58
Trav5-4A0A075B652 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,58
Trav5-4A0A075B652 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Trav5-4A0A075B652 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18,63■□□□□ 0,57
Trav5-4A0A075B652 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18,63■□□□□ 0,57
Trav5-4A0A075B652 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18,63■□□□□ 0,57
Trav5-4A0A075B652 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18,63■□□□□ 0,57
Trav5-4A0A075B652 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Trav5-4A0A075B652 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Trav5-4A0A075B652 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Trav5-4A0A075B652 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Gm17641-201ENSMUST00000166328 2350 ntBASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18,61■□□□□ 0,57
Trav5-4A0A075B652 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18,6■□□□□ 0,57
Trav5-4A0A075B652 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18,59■□□□□ 0,57
Trav5-4A0A075B652 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18,59■□□□□ 0,57
Trav5-4A0A075B652 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18,58■□□□□ 0,57
Trav5-4A0A075B652 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18,58■□□□□ 0,57
Trav5-4A0A075B652 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18,58■□□□□ 0,56
Trav5-4A0A075B652 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav5-4A0A075B652 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18,57■□□□□ 0,56
Trav5-4A0A075B652 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav5-4A0A075B652 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18,57■□□□□ 0,56
Trav5-4A0A075B652 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18,56■□□□□ 0,56
Trav5-4A0A075B652 Gm4799-201ENSMUST00000095396 657 ntBASIC18,56■□□□□ 0,56
Trav5-4A0A075B652 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18,56■□□□□ 0,56
Trav5-4A0A075B652 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav5-4A0A075B652 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Trav5-4A0A075B652 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18,55■□□□□ 0,56
Trav5-4A0A075B652 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav5-4A0A075B652 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav5-4A0A075B652 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav5-4A0A075B652 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Trav5-4A0A075B652 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18,54■□□□□ 0,56
Trav5-4A0A075B652 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Gm7432-201ENSMUST00000210343 879 ntBASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Trav5-4A0A075B652 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18,52■□□□□ 0,56
Trav5-4A0A075B652 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18,52■□□□□ 0,55
Trav5-4A0A075B652 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18,52■□□□□ 0,55
Trav5-4A0A075B652 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18,51■□□□□ 0,55
Trav5-4A0A075B652 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Gm13889-201ENSMUST00000099689 1386 ntBASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Trav5-4A0A075B652 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18,49■□□□□ 0,55
Trav5-4A0A075B652 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav5-4A0A075B652 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18,49■□□□□ 0,55
Trav5-4A0A075B652 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18,49■□□□□ 0,55
Trav5-4A0A075B652 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18,49■□□□□ 0,55
Trav5-4A0A075B652 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18,48■□□□□ 0,55
Retrieved 100 of 76,532 protein–RNA pairs in 17,4 ms