Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 AC153911.1-201ENSMUST00000220378 758 ntBASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16,36■□□□□ 0,21
Trav13d-1A0A075B606 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16,35■□□□□ 0,21
Trav13d-1A0A075B606 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16,34■□□□□ 0,21
Trav13d-1A0A075B606 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16,34■□□□□ 0,21
Trav13d-1A0A075B606 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16,34■□□□□ 0,21
Trav13d-1A0A075B606 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16,34■□□□□ 0,21
Trav13d-1A0A075B606 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16,33■□□□□ 0,21
Trav13d-1A0A075B606 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Terc-201ENSMUST00000082862 423 ntBASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16,33■□□□□ 0,2
Trav13d-1A0A075B606 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16,32■□□□□ 0,2
Trav13d-1A0A075B606 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16,31■□□□□ 0,2
Trav13d-1A0A075B606 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Gm7332-201ENSMUST00000118351 454 ntBASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16,3■□□□□ 0,2
Trav13d-1A0A075B606 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16,29■□□□□ 0,2
Trav13d-1A0A075B606 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16,28■□□□□ 0,2
Trav13d-1A0A075B606 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16,28■□□□□ 0,2
Trav13d-1A0A075B606 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16,28■□□□□ 0,2
Trav13d-1A0A075B606 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16,27■□□□□ 0,2
Trav13d-1A0A075B606 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16,27■□□□□ 0,2
Trav13d-1A0A075B606 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16,27■□□□□ 0,19
Trav13d-1A0A075B606 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16,27■□□□□ 0,19
Trav13d-1A0A075B606 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16,27■□□□□ 0,19
Trav13d-1A0A075B606 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Gm14523-201ENSMUST00000117260 558 ntBASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16,26■□□□□ 0,19
Trav13d-1A0A075B606 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16,25■□□□□ 0,19
Trav13d-1A0A075B606 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16,25■□□□□ 0,19
Trav13d-1A0A075B606 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16,25■□□□□ 0,19
Trav13d-1A0A075B606 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16,24■□□□□ 0,19
Trav13d-1A0A075B606 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16,23■□□□□ 0,19
Trav13d-1A0A075B606 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16,23■□□□□ 0,19
Trav13d-1A0A075B606 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16,23■□□□□ 0,19
Trav13d-1A0A075B606 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16,23■□□□□ 0,19
Trav13d-1A0A075B606 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16,23■□□□□ 0,19
Trav13d-1A0A075B606 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16,23■□□□□ 0,19
Retrieved 100 of 76,532 protein–RNA pairs in 38,8 ms