Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-6A0A075B603 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-6A0A075B603 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav6-6A0A075B603 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-6A0A075B603 Gm30023-201ENSMUST00000197970 889 ntBASIC16.69■□□□□ 0.26
Trav6-6A0A075B603 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-6A0A075B603 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav6-6A0A075B603 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-6A0A075B603 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-6A0A075B603 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-6A0A075B603 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-6A0A075B603 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-6A0A075B603 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-6A0A075B603 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-6A0A075B603 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-6A0A075B603 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-6A0A075B603 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-6A0A075B603 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav6-6A0A075B603 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-6A0A075B603 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-6A0A075B603 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-6A0A075B603 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav6-6A0A075B603 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav6-6A0A075B603 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-6A0A075B603 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-6A0A075B603 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-6A0A075B603 Particl-201ENSMUST00000205370 1560 ntBASIC16.63■□□□□ 0.25
Trav6-6A0A075B603 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-6A0A075B603 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-6A0A075B603 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-6A0A075B603 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-6A0A075B603 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav6-6A0A075B603 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-6A0A075B603 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-6A0A075B603 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-6A0A075B603 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-6A0A075B603 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-6A0A075B603 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-6A0A075B603 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav6-6A0A075B603 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6-6A0A075B603 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav6-6A0A075B603 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6-6A0A075B603 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-6A0A075B603 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-6A0A075B603 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-6A0A075B603 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-6A0A075B603 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-6A0A075B603 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 790.2 ms