Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 KRT18P55-202ENST00000578578 1546 ntBASIC17.28■□□□□ 0.36
VCX3BQ9H321 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 AL390719.1-204ENST00000412397 1219 ntBASIC17.28■□□□□ 0.36
VCX3BQ9H321 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.28■□□□□ 0.36
VCX3BQ9H321 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3BQ9H321 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.27■□□□□ 0.36
VCX3BQ9H321 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.27■□□□□ 0.36
VCX3BQ9H321 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3BQ9H321 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3BQ9H321 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3BQ9H321 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3BQ9H321 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
VCX3BQ9H321 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
VCX3BQ9H321 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3BQ9H321 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3BQ9H321 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 AL357033.4-201ENST00000617703 1807 ntBASIC17.26■□□□□ 0.35
VCX3BQ9H321 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 AC105020.1-201ENST00000435356 2205 ntBASIC17.26■□□□□ 0.35
VCX3BQ9H321 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 GMCL1P1-201ENST00000463439 1581 ntBASIC17.26■□□□□ 0.35
VCX3BQ9H321 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms