Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sft2d3Q9CSV6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sft2d3Q9CSV6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sft2d3Q9CSV6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sft2d3Q9CSV6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms