Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Timm23-208ENSMUST00000226683 750 ntBASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RTRAFQ9CQE8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RTRAFQ9CQE8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
RTRAFQ9CQE8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
RTRAFQ9CQE8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Gm29707-201ENSMUST00000196325 491 ntBASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTRAFQ9CQE8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Gm5643-201ENSMUST00000117081 966 ntBASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms