Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.38□□□□□ -0.11
Ska1Q9CPV1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ska1Q9CPV1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms