Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Gm43767-201ENSMUST00000198933 381 ntBASIC16.15■□□□□ 0.18
TraipQ8VIG6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.15■□□□□ 0.18
TraipQ8VIG6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.15■□□□□ 0.18
TraipQ8VIG6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 Auts2-212ENSMUST00000178555 309 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TraipQ8VIG6 Celf4-206ENSMUST00000224553 1729 ntBASIC16.14■□□□□ 0.17
TraipQ8VIG6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm2810-201ENSMUST00000118681 990 ntBASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm13616-201ENSMUST00000120600 222 ntBASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm11543-201ENSMUST00000120758 370 ntBASIC16.13■□□□□ 0.17
TraipQ8VIG6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TraipQ8VIG6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.13■□□□□ 0.17
TraipQ8VIG6 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.13■□□□□ 0.17
TraipQ8VIG6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.12■□□□□ 0.17
TraipQ8VIG6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms