Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpa1Q8VEE4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpa1Q8VEE4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Gm6433-201ENSMUST00000118634 875 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rpa1Q8VEE4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rpa1Q8VEE4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rpa1Q8VEE4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms