Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vcpip1Q8CDG3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vcpip1Q8CDG3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vcpip1Q8CDG3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vcpip1Q8CDG3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcpip1Q8CDG3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcpip1Q8CDG3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms