Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdhr3Q8BL00 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Gm15165-201ENSMUST00000118140 502 ntBASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Gm8344-201ENSMUST00000119813 856 ntBASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Gm6659-201ENSMUST00000174752 547 ntBASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdhr3Q8BL00 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Gm4459-201ENSMUST00000118750 468 ntBASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdhr3Q8BL00 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms