Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ShbQ6PD21 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.27■□□□□ 0.19
ShbQ6PD21 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ShbQ6PD21 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.26■□□□□ 0.19
ShbQ6PD21 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.26■□□□□ 0.19
ShbQ6PD21 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ShbQ6PD21 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ShbQ6PD21 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
ShbQ6PD21 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShbQ6PD21 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ShbQ6PD21 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShbQ6PD21 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ShbQ6PD21 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.25■□□□□ 0.19
ShbQ6PD21 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.25■□□□□ 0.19
ShbQ6PD21 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.25■□□□□ 0.19
ShbQ6PD21 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShbQ6PD21 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.25■□□□□ 0.19
ShbQ6PD21 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShbQ6PD21 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ShbQ6PD21 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Gm45098-201ENSMUST00000207179 657 ntBASIC16.24■□□□□ 0.19
ShbQ6PD21 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShbQ6PD21 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.24■□□□□ 0.19
ShbQ6PD21 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm12390-201ENSMUST00000117897 397 ntBASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.23■□□□□ 0.19
ShbQ6PD21 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.23■□□□□ 0.19
ShbQ6PD21 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.23■□□□□ 0.19
ShbQ6PD21 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Rarb-207ENSMUST00000225921 2756 ntBASIC16.23■□□□□ 0.19
ShbQ6PD21 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms