Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm21362-201ENSMUST00000194272 928 ntBASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav7-2Q5R1I3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav7-2Q5R1I3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms