Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Gm25406-201ENSMUST00000157599 105 ntBASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Gm44454-201ENSMUST00000198541 138 ntBASIC19.42■□□□□ 0.7
Ccdc27Q3V036 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc27Q3V036 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc27Q3V036 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Gm7367-201ENSMUST00000057611 492 ntBASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc27Q3V036 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc27Q3V036 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc27Q3V036 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc27Q3V036 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc27Q3V036 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms