Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Gm4875-201ENSMUST00000118257 786 ntBASIC15.21■□□□□ 0.03
Fam196aQ3USH1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fam196aQ3USH1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fam196aQ3USH1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.21■□□□□ 0.02
Fam196aQ3USH1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Gm22189-201ENSMUST00000103822 86 ntBASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Fam196aQ3USH1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Gm5566-201ENSMUST00000116118 459 ntBASIC15.19■□□□□ 0.02
Fam196aQ3USH1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam196aQ3USH1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm11425-201ENSMUST00000119608 498 ntBASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm9396-201ENSMUST00000076703 567 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms