Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.8□□□□□ -0.04
Msx2Q03358 Gm43799-201ENSMUST00000201845 579 ntBASIC14.8□□□□□ -0.04
Msx2Q03358 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Msx2Q03358 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Msx2Q03358 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Msx2Q03358 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Msx2Q03358 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Msx2Q03358 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.79□□□□□ -0.04
Msx2Q03358 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Msx2Q03358 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx2Q03358 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Msx2Q03358 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Msx2Q03358 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx2Q03358 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx2Q03358 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx2Q03358 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Msx2Q03358 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.78□□□□□ -0.04
Msx2Q03358 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.78□□□□□ -0.04
Msx2Q03358 Gm22697-201ENSMUST00000175194 63 ntBASIC14.78□□□□□ -0.04
Msx2Q03358 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.78□□□□□ -0.04
Msx2Q03358 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.78□□□□□ -0.04
Msx2Q03358 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx2Q03358 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Msx2Q03358 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Msx2Q03358 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.77□□□□□ -0.04
Msx2Q03358 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msx2Q03358 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.77□□□□□ -0.05
Msx2Q03358 Gm12134-201ENSMUST00000122109 520 ntBASIC14.77□□□□□ -0.05
Msx2Q03358 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.77□□□□□ -0.05
Msx2Q03358 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.77□□□□□ -0.05
Msx2Q03358 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Gm9987-201ENSMUST00000069768 567 ntBASIC14.77□□□□□ -0.05
Msx2Q03358 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Msx2Q03358 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msx2Q03358 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms