Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHB3P54753 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHB3P54753 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHB3P54753 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB3P54753 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 ESPNP-201ENST00000270691 2015 ntBASIC18.88■□□□□ 0.61
EPHB3P54753 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 AC126763.1-201ENST00000552015 2118 ntBASIC18.88■□□□□ 0.61
EPHB3P54753 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.88■□□□□ 0.61
EPHB3P54753 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.88■□□□□ 0.61
EPHB3P54753 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.88■□□□□ 0.61
EPHB3P54753 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.88■□□□□ 0.61
EPHB3P54753 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.88■□□□□ 0.61
EPHB3P54753 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.88■□□□□ 0.61
EPHB3P54753 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 MTDHP3-201ENST00000594186 672 ntBASIC18.88■□□□□ 0.61
EPHB3P54753 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.88■□□□□ 0.61
EPHB3P54753 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EPHB3P54753 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EPHB3P54753 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHB3P54753 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHB3P54753 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHB3P54753 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.87■□□□□ 0.61
EPHB3P54753 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHB3P54753 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHB3P54753 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.87■□□□□ 0.61
EPHB3P54753 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHB3P54753 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHB3P54753 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EPHB3P54753 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.86■□□□□ 0.61
EPHB3P54753 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 AL590627.1-203ENST00000421194 1026 ntBASIC18.86■□□□□ 0.61
EPHB3P54753 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 SCARNA2-201ENST00000458748 420 ntBASIC18.86■□□□□ 0.61
EPHB3P54753 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 AC120114.3-201ENST00000611923 658 ntBASIC18.86■□□□□ 0.61
EPHB3P54753 BX640515.1-201ENST00000617215 977 ntBASIC18.86■□□□□ 0.61
EPHB3P54753 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHB3P54753 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHB3P54753 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHB3P54753 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
EPHB3P54753 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EPHB3P54753 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms