Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox3P53784 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Gm9172-201ENSMUST00000212092 954 ntBASIC14.57□□□□□ -0.08
Sox3P53784 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox3P53784 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sox3P53784 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox3P53784 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox3P53784 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox3P53784 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.57□□□□□ -0.08
Sox3P53784 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox3P53784 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox3P53784 Mir1895-201ENSMUST00000122615 79 ntBASIC14.56□□□□□ -0.08
Sox3P53784 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox3P53784 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.56□□□□□ -0.08
Sox3P53784 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox3P53784 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox3P53784 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.56□□□□□ -0.08
Sox3P53784 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox3P53784 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.55□□□□□ -0.08
Sox3P53784 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox3P53784 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Gm27494-201ENSMUST00000184735 189 ntBASIC14.55□□□□□ -0.08
Sox3P53784 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.55□□□□□ -0.08
Sox3P53784 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox3P53784 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox3P53784 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox3P53784 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.55□□□□□ -0.08
Sox3P53784 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox3P53784 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox3P53784 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms