Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.07□□□□□ -0.16
Foxa1P35582 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.07□□□□□ -0.16
Foxa1P35582 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.07□□□□□ -0.16
Foxa1P35582 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Foxa1P35582 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Foxa1P35582 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Foxa1P35582 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxa1P35582 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.06□□□□□ -0.16
Foxa1P35582 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Foxa1P35582 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Foxa1P35582 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.06□□□□□ -0.16
Foxa1P35582 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.06□□□□□ -0.16
Foxa1P35582 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Foxa1P35582 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.06□□□□□ -0.16
Foxa1P35582 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.06□□□□□ -0.16
Foxa1P35582 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Foxa1P35582 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.05□□□□□ -0.16
Foxa1P35582 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.05□□□□□ -0.16
Foxa1P35582 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.05□□□□□ -0.16
Foxa1P35582 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.05□□□□□ -0.16
Foxa1P35582 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.05□□□□□ -0.16
Foxa1P35582 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Foxa1P35582 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.05□□□□□ -0.16
Foxa1P35582 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Foxa1P35582 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxa1P35582 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.04□□□□□ -0.16
Foxa1P35582 Gm44771-201ENSMUST00000206975 626 ntBASIC14.04□□□□□ -0.16
Foxa1P35582 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.04□□□□□ -0.16
Foxa1P35582 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms