Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RaraP11416 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RaraP11416 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RaraP11416 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.46■□□□□ 0.23
RaraP11416 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RaraP11416 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.46■□□□□ 0.23
RaraP11416 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RaraP11416 Gm12644-201ENSMUST00000119935 606 ntBASIC16.46■□□□□ 0.23
RaraP11416 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.46■□□□□ 0.23
RaraP11416 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RaraP11416 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.46■□□□□ 0.23
RaraP11416 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RaraP11416 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RaraP11416 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RaraP11416 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RaraP11416 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RaraP11416 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RaraP11416 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.45■□□□□ 0.22
RaraP11416 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.45■□□□□ 0.22
RaraP11416 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RaraP11416 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.45■□□□□ 0.22
RaraP11416 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RaraP11416 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.45■□□□□ 0.22
RaraP11416 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RaraP11416 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RaraP11416 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.44■□□□□ 0.22
RaraP11416 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.44■□□□□ 0.22
RaraP11416 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.44■□□□□ 0.22
RaraP11416 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.44■□□□□ 0.22
RaraP11416 Celf4-206ENSMUST00000224553 1729 ntBASIC16.44■□□□□ 0.22
RaraP11416 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RaraP11416 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.44■□□□□ 0.22
RaraP11416 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RaraP11416 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RaraP11416 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RaraP11416 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms