Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.4□□□□□ -0.1
ApoeP08226 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.4□□□□□ -0.1
ApoeP08226 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ApoeP08226 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ApoeP08226 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.39□□□□□ -0.11
ApoeP08226 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
ApoeP08226 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.39□□□□□ -0.11
ApoeP08226 Gm43799-201ENSMUST00000201845 579 ntBASIC14.39□□□□□ -0.11
ApoeP08226 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ApoeP08226 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ApoeP08226 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ApoeP08226 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
ApoeP08226 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.39□□□□□ -0.11
ApoeP08226 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.39□□□□□ -0.11
ApoeP08226 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ApoeP08226 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ApoeP08226 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ApoeP08226 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.38□□□□□ -0.11
ApoeP08226 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.38□□□□□ -0.11
ApoeP08226 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ApoeP08226 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.38□□□□□ -0.11
ApoeP08226 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.38□□□□□ -0.11
ApoeP08226 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms