Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shisa8J3QNX5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Shisa8J3QNX5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shisa8J3QNX5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Shisa8J3QNX5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shisa8J3QNX5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm18101-201ENSMUST00000215769 548 ntBASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shisa8J3QNX5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa8J3QNX5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms