Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Gm43799-201ENSMUST00000201845 579 ntBASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1bQ9D0N7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Mir770-201ENSMUST00000103252 94 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1bQ9D0N7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chaf1bQ9D0N7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms