Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Gm9172-201ENSMUST00000212092 954 ntBASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf111Q99ML9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gm12134-201ENSMUST00000122109 520 ntBASIC14.78□□□□□ -0.04
Rnf111Q99ML9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf111Q99ML9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf111Q99ML9 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms