Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.41■□□□□ 0.06
Cdk9Q99J95 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cdk9Q99J95 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Gm10052-201ENSMUST00000168019 960 ntBASIC15.4■□□□□ 0.06
Cdk9Q99J95 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Gm18101-201ENSMUST00000215769 548 ntBASIC15.4■□□□□ 0.06
Cdk9Q99J95 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Gm7729-201ENSMUST00000050143 801 ntBASIC15.4■□□□□ 0.06
Cdk9Q99J95 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk9Q99J95 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Gm6659-201ENSMUST00000174752 547 ntBASIC15.39■□□□□ 0.05
Cdk9Q99J95 Gm22697-201ENSMUST00000175194 63 ntBASIC15.39■□□□□ 0.05
Cdk9Q99J95 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.39■□□□□ 0.05
Cdk9Q99J95 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk9Q99J95 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Gm6257-201ENSMUST00000163864 910 ntBASIC15.38■□□□□ 0.05
Cdk9Q99J95 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Gm44430-201ENSMUST00000203376 995 ntBASIC15.38■□□□□ 0.05
Cdk9Q99J95 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk9Q99J95 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk9Q99J95 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk9Q99J95 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk9Q99J95 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms