Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR1H4Q96RI1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR1H4Q96RI1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NR1H4Q96RI1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR1H4Q96RI1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.12■□□□□ 0.33
NR1H4Q96RI1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TSPY21P-201ENST00000433481 731 ntBASIC17.11■□□□□ 0.33
NR1H4Q96RI1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 AL591742.1-201ENST00000604433 565 ntBASIC17.11■□□□□ 0.33
NR1H4Q96RI1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 AC124283.5-201ENST00000624661 1809 ntBASIC17.11■□□□□ 0.33
NR1H4Q96RI1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 AC092850.2-201ENST00000623821 2697 ntBASIC17.11■□□□□ 0.33
NR1H4Q96RI1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.11■□□□□ 0.33
NR1H4Q96RI1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC137761.2-201ENST00000561729 223 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC145350.3-201ENST00000569033 163 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC087623.3-201ENST00000607047 1098 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC105020.6-201ENST00000621523 1217 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AC068587.9-201ENST00000641814 219 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 AL603756.1-201ENST00000606511 2163 ntBASIC17.1■□□□□ 0.33
NR1H4Q96RI1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR1H4Q96RI1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.09■□□□□ 0.33
NR1H4Q96RI1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 KRT18P55-202ENST00000578578 1546 ntBASIC17.09■□□□□ 0.33
NR1H4Q96RI1 RCC2P6-201ENST00000526625 1557 ntBASIC17.09■□□□□ 0.33
NR1H4Q96RI1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.09■□□□□ 0.33
NR1H4Q96RI1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
NR1H4Q96RI1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NR1H4Q96RI1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NR1H4Q96RI1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms