Protein–RNA interactions for Protein: Q8VCH8

Ubxn4, UBX domain-containing protein 4, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn4Q8VCH8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubxn4Q8VCH8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubxn4Q8VCH8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Gm19164-201ENSMUST00000210667 640 ntBASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubxn4Q8VCH8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubxn4Q8VCH8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubxn4Q8VCH8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubxn4Q8VCH8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms