Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim52Q8CDV4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Gm18049-201ENSMUST00000208909 581 ntBASIC18.72■□□□□ 0.59
Trim52Q8CDV4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim52Q8CDV4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Gm27321-201ENSMUST00000185021 205 ntBASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim52Q8CDV4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Gm38294-201ENSMUST00000192831 381 ntBASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.7■□□□□ 0.58
Trim52Q8CDV4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.7■□□□□ 0.58
Trim52Q8CDV4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms