Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp1Q8BJQ2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Gm8318-201ENSMUST00000182954 872 ntBASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Grk6-207ENSMUST00000225925 2769 ntBASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Usp1Q8BJQ2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Gm13616-201ENSMUST00000120600 222 ntBASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Mir6956-201ENSMUST00000183598 62 ntBASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Usp1Q8BJQ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm13365-201ENSMUST00000121188 973 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm44335-201ENSMUST00000196879 141 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm44297-201ENSMUST00000198304 141 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm44346-201ENSMUST00000198851 141 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp1Q8BJQ2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms