Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Gm18195-201ENSMUST00000207604 706 ntBASIC17.87■□□□□ 0.45
Samm50Q8BGH2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Samm50Q8BGH2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Efs-202ENSMUST00000227037 2540 ntBASIC17.86■□□□□ 0.45
Samm50Q8BGH2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Samm50Q8BGH2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Gm8655-201ENSMUST00000221159 852 ntBASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms