Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcp4P63054 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Pcp4P63054 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Pcp4P63054 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.25□□□□□ -0.77
Pcp4P63054 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 AC117245.4-201ENSMUST00000217388 1646 ntBASIC10.25□□□□□ -0.77
Pcp4P63054 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcp4P63054 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcp4P63054 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcp4P63054 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Pcp4P63054 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Pcp4P63054 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Pcp4P63054 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcp4P63054 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcp4P63054 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pcp4P63054 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.23□□□□□ -0.77
Pcp4P63054 AC125311.2-201ENSMUST00000227477 1940 ntBASIC10.23□□□□□ -0.77
Pcp4P63054 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pcp4P63054 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcp4P63054 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Grk6-205ENSMUST00000224653 2976 ntBASIC10.23□□□□□ -0.77
Pcp4P63054 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcp4P63054 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.22□□□□□ -0.77
Pcp4P63054 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pcp4P63054 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcp4P63054 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms