Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.73■□□□□ 0.11
Msh2P43247 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.73■□□□□ 0.11
Msh2P43247 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.73■□□□□ 0.11
Msh2P43247 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh2P43247 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.73■□□□□ 0.11
Msh2P43247 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh2P43247 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh2P43247 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Msh2P43247 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Msh2P43247 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh2P43247 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Msh2P43247 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh2P43247 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Msh2P43247 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Msh2P43247 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.72■□□□□ 0.11
Msh2P43247 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.72■□□□□ 0.11
Msh2P43247 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Gm17971-201ENSMUST00000190239 806 ntBASIC15.72■□□□□ 0.11
Msh2P43247 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Msh2P43247 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Msh2P43247 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh2P43247 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Msh2P43247 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Msh2P43247 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.71■□□□□ 0.11
Msh2P43247 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.71■□□□□ 0.11
Msh2P43247 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Msh2P43247 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh2P43247 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Msh2P43247 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh2P43247 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.71■□□□□ 0.1
Msh2P43247 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh2P43247 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Msh2P43247 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.7■□□□□ 0.1
Msh2P43247 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Msh2P43247 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.7■□□□□ 0.1
Msh2P43247 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.7■□□□□ 0.1
Msh2P43247 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Msh2P43247 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.7■□□□□ 0.1
Msh2P43247 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Msh2P43247 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msh2P43247 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh2P43247 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms