Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nckap1P28660 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nckap1P28660 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.16■□□□□ 0.02
Nckap1P28660 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nckap1P28660 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nckap1P28660 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nckap1P28660 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nckap1P28660 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Nckap1P28660 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.15■□□□□ 0.02
Nckap1P28660 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.15■□□□□ 0.02
Nckap1P28660 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Gm2272-201ENSMUST00000194903 582 ntBASIC15.15■□□□□ 0.02
Nckap1P28660 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.15■□□□□ 0.02
Nckap1P28660 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.15■□□□□ 0.02
Nckap1P28660 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.15■□□□□ 0.02
Nckap1P28660 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.15■□□□□ 0.02
Nckap1P28660 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nckap1P28660 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.14■□□□□ 0.01
Nckap1P28660 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Nckap1P28660 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nckap1P28660 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Rprl2-201ENSMUST00000157150 290 ntBASIC15.14■□□□□ 0.01
Nckap1P28660 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.14■□□□□ 0.01
Nckap1P28660 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nckap1P28660 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nckap1P28660 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nckap1P28660 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.13■□□□□ 0.01
Nckap1P28660 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nckap1P28660 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nckap1P28660 Gm44872-201ENSMUST00000207864 420 ntBASIC15.13■□□□□ 0.01
Nckap1P28660 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nckap1P28660 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nckap1P28660 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nckap1P28660 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.13■□□□□ 0.01
Nckap1P28660 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms