Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P03980 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P03980 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P03980 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Gm6623-201ENSMUST00000173570 544 ntBASIC11.79□□□□□ -0.52
P03980 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.79□□□□□ -0.52
P03980 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.79□□□□□ -0.52
P03980 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.79□□□□□ -0.52
P03980 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.79□□□□□ -0.52
P03980 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.79□□□□□ -0.52
P03980 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P03980 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
P03980 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P03980 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P03980 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.78□□□□□ -0.52
P03980 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.78□□□□□ -0.52
P03980 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.78□□□□□ -0.52
P03980 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P03980 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P03980 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
P03980 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.78□□□□□ -0.52
P03980 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.78□□□□□ -0.52
P03980 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.78□□□□□ -0.52
P03980 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.78□□□□□ -0.52
P03980 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
P03980 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.78□□□□□ -0.52
P03980 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P03980 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.78□□□□□ -0.52
P03980 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P03980 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
P03980 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.77□□□□□ -0.52
P03980 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.77□□□□□ -0.52
P03980 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P03980 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P03980 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P03980 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms