Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.05□□□□□ -0.48
Pde6dO55057 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Gm7367-201ENSMUST00000057611 492 ntBASIC12.05□□□□□ -0.48
Pde6dO55057 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pde6dO55057 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pde6dO55057 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.05□□□□□ -0.48
Pde6dO55057 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pde6dO55057 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pde6dO55057 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.04□□□□□ -0.48
Pde6dO55057 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pde6dO55057 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Timm23-208ENSMUST00000226683 750 ntBASIC12.04□□□□□ -0.48
Pde6dO55057 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pde6dO55057 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pde6dO55057 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pde6dO55057 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Pde6dO55057 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pde6dO55057 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.03□□□□□ -0.48
Pde6dO55057 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pde6dO55057 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms