Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1bO55017 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Gm6415-201ENSMUST00000118488 348 ntBASIC14.69□□□□□ -0.06
Cacna1bO55017 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.69□□□□□ -0.06
Cacna1bO55017 Gm14722-201ENSMUST00000118943 689 ntBASIC14.69□□□□□ -0.06
Cacna1bO55017 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.69□□□□□ -0.06
Cacna1bO55017 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1bO55017 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.68□□□□□ -0.06
Cacna1bO55017 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.68□□□□□ -0.06
Cacna1bO55017 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cacna1bO55017 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1bO55017 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 Gm44719-201ENSMUST00000206404 149 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms