Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.51■□□□□ 0.23
Ube3aO08759 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube3aO08759 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube3aO08759 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ube3aO08759 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube3aO08759 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.51■□□□□ 0.23
Ube3aO08759 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3aO08759 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Ube3aO08759 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ube3aO08759 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ube3aO08759 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube3aO08759 Gm6623-201ENSMUST00000173570 544 ntBASIC16.5■□□□□ 0.23
Ube3aO08759 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.5■□□□□ 0.23
Ube3aO08759 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ube3aO08759 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.5■□□□□ 0.23
Ube3aO08759 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3aO08759 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Gm9013-201ENSMUST00000132939 882 ntBASIC16.49■□□□□ 0.23
Ube3aO08759 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Gm5587-201ENSMUST00000206270 674 ntBASIC16.49■□□□□ 0.23
Ube3aO08759 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube3aO08759 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ube3aO08759 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ube3aO08759 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ube3aO08759 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ube3aO08759 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3aO08759 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ube3aO08759 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube3aO08759 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ube3aO08759 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube3aO08759 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Ube3aO08759 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube3aO08759 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube3aO08759 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube3aO08759 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube3aO08759 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube3aO08759 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.48■□□□□ 0.23
Ube3aO08759 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Ube3aO08759 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ube3aO08759 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3aO08759 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3aO08759 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube3aO08759 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3aO08759 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3aO08759 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms