Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Polr2jO08740 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.64□□□□□ -0.07
Polr2jO08740 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.64□□□□□ -0.07
Polr2jO08740 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.64□□□□□ -0.07
Polr2jO08740 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.64□□□□□ -0.07
Polr2jO08740 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Polr2jO08740 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Polr2jO08740 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.63□□□□□ -0.07
Polr2jO08740 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.63□□□□□ -0.07
Polr2jO08740 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.63□□□□□ -0.07
Polr2jO08740 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.63□□□□□ -0.07
Polr2jO08740 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.63□□□□□ -0.07
Polr2jO08740 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Polr2jO08740 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Polr2jO08740 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.63□□□□□ -0.07
Polr2jO08740 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Polr2jO08740 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Polr2jO08740 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Polr2jO08740 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Polr2jO08740 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Polr2jO08740 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.62□□□□□ -0.07
Polr2jO08740 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Polr2jO08740 Grk6-207ENSMUST00000225925 2769 ntBASIC14.62□□□□□ -0.07
Polr2jO08740 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.62□□□□□ -0.07
Polr2jO08740 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Polr2jO08740 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Polr2jO08740 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Polr2jO08740 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms