Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.48■□□□□ 0.39
Syce3B5KM66 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.47■□□□□ 0.39
Syce3B5KM66 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Gm13559-201ENSMUST00000120476 863 ntBASIC17.47■□□□□ 0.39
Syce3B5KM66 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Syce3B5KM66 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.47■□□□□ 0.39
Syce3B5KM66 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.47■□□□□ 0.39
Syce3B5KM66 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Syce3B5KM66 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Syce3B5KM66 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.47■□□□□ 0.39
Syce3B5KM66 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.47■□□□□ 0.39
Syce3B5KM66 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syce3B5KM66 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.46■□□□□ 0.39
Syce3B5KM66 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.46■□□□□ 0.39
Syce3B5KM66 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 Carlr-201ENSMUST00000181515 2574 ntBASIC17.46■□□□□ 0.39
Syce3B5KM66 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.46■□□□□ 0.39
Syce3B5KM66 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syce3B5KM66 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.46■□□□□ 0.39
Syce3B5KM66 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Syce3B5KM66 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Syce3B5KM66 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Syce3B5KM66 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.45■□□□□ 0.38
Syce3B5KM66 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.45■□□□□ 0.38
Syce3B5KM66 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Gm9987-201ENSMUST00000069768 567 ntBASIC17.45■□□□□ 0.38
Syce3B5KM66 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syce3B5KM66 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Syce3B5KM66 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Grk6-207ENSMUST00000225925 2769 ntBASIC17.44■□□□□ 0.38
Syce3B5KM66 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.44■□□□□ 0.38
Syce3B5KM66 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Syce3B5KM66 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Syce3B5KM66 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syce3B5KM66 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syce3B5KM66 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms