Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mindy4b-psA0A1W2P7H6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Mindy4b-psA0A1W2P7H6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Mindy4b-psA0A1W2P7H6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mindy4b-psA0A1W2P7H6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm12008-201ENSMUST00000117791 755 ntBASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mindy4b-psA0A1W2P7H6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms