Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn6Q9Z262 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Gm7153-201ENSMUST00000117092 455 ntBASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn6Q9Z262 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn6Q9Z262 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn6Q9Z262 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn6Q9Z262 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms