Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.57□□□□□ -0.08
VapaQ9WV55 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
VapaQ9WV55 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
VapaQ9WV55 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VapaQ9WV55 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VapaQ9WV55 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.57□□□□□ -0.08
VapaQ9WV55 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VapaQ9WV55 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.56□□□□□ -0.08
VapaQ9WV55 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.56□□□□□ -0.08
VapaQ9WV55 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VapaQ9WV55 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.56□□□□□ -0.08
VapaQ9WV55 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Gm15372-201ENSMUST00000120729 834 ntBASIC14.55□□□□□ -0.08
VapaQ9WV55 Mir7071-201ENSMUST00000184847 69 ntBASIC14.55□□□□□ -0.08
VapaQ9WV55 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.55□□□□□ -0.08
VapaQ9WV55 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VapaQ9WV55 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VapaQ9WV55 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.54□□□□□ -0.08
VapaQ9WV55 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VapaQ9WV55 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VapaQ9WV55 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VapaQ9WV55 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms