Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Gm17808-201ENSMUST00000200859 894 ntBASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gm29518-201ENSMUST00000190858 372 ntBASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gm9172-201ENSMUST00000212092 954 ntBASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp5Q9D7S9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Gm38058-201ENSMUST00000194323 4368 ntBASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp5Q9D7S9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm10231-201ENSMUST00000181584 441 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Gm10175-202ENSMUST00000208752 441 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp5Q9D7S9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms