Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rnf111Q99ML9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm6257-201ENSMUST00000163864 910 ntBASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm25745-201ENSMUST00000174945 133 ntBASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf111Q99ML9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm15372-201ENSMUST00000120729 834 ntBASIC14.82□□□□□ -0.04
Rnf111Q99ML9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm44487-201ENSMUST00000205145 325 ntBASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf111Q99ML9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gm9103-201ENSMUST00000119371 405 ntBASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gm28033-201ENSMUST00000184224 96 ntBASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf111Q99ML9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf111Q99ML9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms