Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.97■□□□□ 0.47
Col20a1Q923P0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col20a1Q923P0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.96■□□□□ 0.46
Col20a1Q923P0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Gm43125-201ENSMUST00000201724 730 ntBASIC17.96■□□□□ 0.46
Col20a1Q923P0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Col20a1Q923P0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.96■□□□□ 0.46
Col20a1Q923P0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.95■□□□□ 0.46
Col20a1Q923P0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col20a1Q923P0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.94■□□□□ 0.46
Col20a1Q923P0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.94■□□□□ 0.46
Col20a1Q923P0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Gm43474-201ENSMUST00000196415 774 ntBASIC17.94■□□□□ 0.46
Col20a1Q923P0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.94■□□□□ 0.46
Col20a1Q923P0 App-207ENSMUST00000227737 2827 ntBASIC17.94■□□□□ 0.46
Col20a1Q923P0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col20a1Q923P0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col20a1Q923P0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms